Color scheme: A-to-N substitutions are highlighted in yellow; other substitutions in gray
Template:  SRS050299_LANL_scaffold_23470 strand: - 80-213 ref: 81-214

Variable:  SRS050299_LANL_scaffold_23470 strand: - 883-1016 alnlen 133 mutations 13 involve-A 12 involve-T 1

CACGTCAGGCAACTATTGGTCTGCCTCTGAGGCTTCCGCAGAGTTGGGTTGGAACCAGAATTTCAACAATGGCAACCGCAACAGGAACGCTAAGTCCAATGTGAACAATGTCCGCTGTGTCAGGTGATAAATT (Template)
CACGTCAGGCGCCTATTGGTCTGCCTCTGAGGCTTCCGCAGAGTTGGGTTGGGGCCAGTATTTCTACAATGGCCACCGCTACAGGAGCGCTAAGTCCAATGTGGGCAATGTCCGCTGTGTCAGGAGATAAGTT (Variable)