Template:  SRS050299_LANL_scaffold_5926 strand: + 39751-39865 ref: 39751-39865
Variable:  SRS050299_LANL_scaffold_5926 strand: + 39566-39680 alnlen 114 mutations 13 involve-A 12 involve-T 0

39751      GTGCCCTCTTGTCTGCTAATGCGAATAATGGTGCGAATGCGGGTTTCGGTTATCTGAATACGAATAATCGCTCCTCGAACTCGAATGCGAACATTGGGTTCCGCCTATACCGTT 
           :::::::::::::::::  ::::::::::::::::: :::::::::::::: ::::  ::::::::::::::: ::: :::::  ::::::: ::::::::::::: : :::::
39566      GTGCCCTCTTGTCTGCTTCTGCGAATAATGGTGCGACTGCGGGTTTCGGTTCTCTGTTTACGAATAATCGCTCTTCGTACTCGTCTGCGAACTTTGGGTTCCGCCTGTGCCGTT