Color scheme: A-to-N substitutions are highlighted in yellow; other substitutions in gray
Template:  SRS050299_LANL_scaffold_5926 strand: + 39751-39865 ref: 39751-39865

Variable:  SRS050299_LANL_scaffold_5926 strand: + 39566-39680 alnlen 114 mutations 13 involve-A 12 involve-T 0

GTGCCCTCTTGTCTGCTAATGCGAATAATGGTGCGAATGCGGGTTTCGGTTATCTGAATACGAATAATCGCTCCTCGAACTCGAATGCGAACATTGGGTTCCGCCTATACCGTT (Template)
GTGCCCTCTTGTCTGCTTCTGCGAATAATGGTGCGACTGCGGGTTTCGGTTCTCTGTTTACGAATAATCGCTCTTCGTACTCGTCTGCGAACTTTGGGTTCCGCCTGTGCCGTT (Variable)