Template:  SRS050299_LANL_scaffold_687 strand: + 17038-17150 ref: 17038-17150
Variable:  SRS050299_LANL_scaffold_687 strand: + 16493-16605 alnlen 112 mutations 22 involve-A 22 involve-T 0

17038      GGTGTCTTGTTCGGCGGTAATGCGAATAACAGCGCGAATGCCGGGCTTTCGTACGCGAATACGAATAACACGGCTACGAATACGAATGCGAATATCGGCTCTCAGCTATACT 
           ::::::::::::::::::::::::: :  : :::::  :::::::::::::: ::::  ::::  : :: ::::: ::: ::::  :::: :: ::::::::: ::: : ::
16493      GGTGTCTTGTTCGGCGGTAATGCGACTTGCGGCGCGTCTGCCGGGCTTTCGTTCGCGGCTACGTCTTACGCGGCTGCGAGTACGGCTGCGCATTTCGGCTCTCGGCTTTGCT