Template:  SRS050422_LANL_scaffold_42845 strand: - 13552-13668 ref: 13553-13669
Variable:  SRS050422_LANL_scaffold_42845 strand: - 14209-14325 alnlen 116 mutations 11 involve-A 11 involve-T 0

13668      AACGCTTGCCGATTGTCTCTGGCAGTTACAACAACACTTCGAACGCTGGCCCTTCCGCGTTGAACTTGAACAACCCACGTTCGAACGTCAGGACGAACATCGGCTTCTTCTCCGCT (revcomp)
           :::::::::::::::::::::::::::::::: :: :::::: ::::::::::::::::::: :::::  : ::::::::::: ::::: :: ::::: :::::::::::::::::
14325      AACGCTTGCCGATTGTCTCTGGCAGTTACAACTACGCTTCGAGCGCTGGCCCTTCCGCGTTGTACTTGCTCTACCCACGTTCGTACGTCGGGGCGAACTTCGGCTTCTTCTCCGCT (revcomp)