Template:  SRS050422_LANL_scaffold_50 strand: + 751-878 ref: 751-878
Variable:  SRS050422_LANL_scaffold_50 strand: + 4-131 alnlen 127 mutations 17 involve-A 17 involve-T 0

751        ACTGGTCCTCCTCGGAGTTCTACAACAATCCGGCGAACAACGCTCTTTATGTGAATGTGAACAACGGCAACGTGAACAACAACAATAAGAACAACAGAAATAGTTACGTGCGTCCGGTCTTGGCTTT 
           ::::::::::::::::::::: : ::  :::::::: :  :::::::::::::: ::::: :  :::::::::: ::::: ::: :::: :: :::: :::::::::::::::::::::::::::::
4          ACTGGTCCTCCTCGGAGTTCTGCGACCTTCCGGCGAGCGGCGCTCTTTATGTGAGTGTGAGCGGCGGCAACGTGTACAACTACAGTAAGGACGACAGGAATAGTTACGTGCGTCCGGTCTTGGCTTT