Color scheme: A-to-N substitutions are highlighted in yellow; other substitutions in gray
Template:  SRS050422_LANL_scaffold_50 strand: + 751-878 ref: 751-878

Variable:  SRS050422_LANL_scaffold_50 strand: + 4-131 alnlen 127 mutations 17 involve-A 17 involve-T 0

ACTGGTCCTCCTCGGAGTTCTACAACAATCCGGCGAACAACGCTCTTTATGTGAATGTGAACAACGGCAACGTGAACAACAACAATAAGAACAACAGAAATAGTTACGTGCGTCCGGTCTTGGCTTT (Template)
ACTGGTCCTCCTCGGAGTTCTGCGACCTTCCGGCGAGCGGCGCTCTTTATGTGAGTGTGAGCGGCGGCAACGTGTACAACTACAGTAAGGACGACAGGAATAGTTACGTGCGTCCGGTCTTGGCTTT (Variable)