Template: SRS050925_LANL_scaffold_21627 strand: + 22584-22698 ref: 22584-22698 Variable: SRS050925_LANL_scaffold_21627 strand: + 22386-22500 alnlen 114 mutations 18 involve-A 18 involve-T 0 22584 GGTGTCCTTTTCAGCGGTAATACGAATAATGGCGATCATGCAGGCTTCGGTTATGCGAATACGAATAACACCCCCTCGAATACGAATGCGAATGTCAGCTCTCAGCTATGATTT :::::::::::: ::::: :: :: ::::::::::: ::: ::::::::::::::: ::::: :: :: ::::::::: ::::: ::::: :::: :::::: ::: :: ::: 22386 GGTGTCCTTTTCGGCGGTGATGCGCGTAATGGCGATCGTGCGGGCTTCGGTTATGCGCATACGGATTACGCCCCCTCGATTACGACTGCGACTGTCGGCTCTCGGCTTTGTTTT