Color scheme: A-to-N substitutions are highlighted in yellow; other substitutions in gray
Template:  SRS050925_LANL_scaffold_21627 strand: + 22584-22698 ref: 22584-22698

Variable:  SRS050925_LANL_scaffold_21627 strand: + 22386-22500 alnlen 114 mutations 18 involve-A 18 involve-T 0

GGTGTCCTTTTCAGCGGTAATACGAATAATGGCGATCATGCAGGCTTCGGTTATGCGAATACGAATAACACCCCCTCGAATACGAATGCGAATGTCAGCTCTCAGCTATGATTT (Template)
GGTGTCCTTTTCGGCGGTGATGCGCGTAATGGCGATCGTGCGGGCTTCGGTTATGCGCATACGGATTACGCCCCCTCGATTACGACTGCGACTGTCGGCTCTCGGCTTTGTTTT (Variable)