myDGR

myDGR report for SRS050925_LANL_scaffold_5503

Seq: SRS050925_LANL_scaffold_5503 (37864 bp)

Download:  annotation in gff; reverse transcriptase (RT); target gene; genes next to RT

Explore:   TR-VR alignment (colored, MSA); domain organization of the target protein(s); similar RTs

Visualize: summary of the putative DGR system(s) (explain)

Overview 1 Locus 1: 1-19070 bp Zoom in on locus 1 Feature: CDS Location: 1-411 bp Feature: CDS Location: 392-589 bp Feature: CDS Location: 608-817 bp Feature: CDS Location: 970-1350 bp Feature: CDS Location: 1608-1805 bp Feature: CDS Location: 1878-2330 bp Feature: CDS Location: 2507-3598 bp Feature: CDS Location: 3613-3951 bp Feature: CDS Location: 4052-4180 bp Feature: CDS Location: 4295-5020 bp Feature: CDS Location: 5038-5853 bp Feature: CDS Location: 5850-6185 bp Feature: CDS Location: 6178-6543 bp Feature: CDS Location: 6540-6908 bp Feature: CDS Location: 6957-7271 bp Feature: CDS Location: 7498-7650 bp Feature: CDS Location: 7652-7966 bp Feature: RT Des: DGR reverse transcriptase Location: 7803-9101 bp Feature: CDS Location: 9184-9378 bp Feature: target Des: target gene diversified by DGR Location: 9560-10798 bp Feature: CDS Location: 10798-11184 bp Feature: CDS Location: 11202-12044 bp Feature: CDS Location: 12058-13068 bp Feature: CDS Location: 13080-13787 bp Feature: CDS Location: 13792-17160 bp Feature: CDS Location: 17181-17705 bp Feature: CDS Location: 17702-18037 bp Feature: CDS Location: 18070-18705 bp Feature: CDS Location: 18702-19070 bp Sorry, your browser does not support inline SVG.