Template:  SRS051031_LANL_scaffold_4812 strand: + 4468-4576 ref: 4468-4576
Variable:  SRS051031_LANL_scaffold_4812 strand: + 4253-4361 alnlen 108 mutations 17 involve-A 17 involve-T 0

4468       CGTATGTCGGCGGCAACTGGAACAATGACCTTATGGTCGGTCCTTTCTACGCTAATCTGAACAATACGGCGTCCAATTCGAACTCGAACAATGGCGCGGCTCTATCTT 
           ::: ::::::::::  ::::  :::::::::: ::::::::::::::: ::::: :::: :: :: ::::::::: :::: :::::  : ::::::::::::: ::::
4253       CGTGTGTCGGCGGCCGCTGGGGCAATGACCTTTTGGTCGGTCCTTTCTGCGCTACTCTGGACGATGCGGCGTCCAGTTCGTACTCGGCCTATGGCGCGGCTCTCTCTT