Color scheme: A-to-N substitutions are highlighted in yellow; other substitutions in gray
Template:  SRS051031_LANL_scaffold_62496 strand: - 6287-6398 ref: 6278-6399

Variable:  SRS051031_LANL_scaffold_62496 strand: - 6515-6626 alnlen 111 mutations 14 involve-A 14 involve-T 0

TGTCACTAAATTAGGTGCTAATTGGAATAATGGCTTGAATACCAGTGCTTTCTTTTGGAGTCTGGATGATGCTTCTTCTAGTCGTTATCGGAATATCAGCAGTCAGTTAGT (Template)
TGTCGCTGTATTGGGTGCTAGTTGGAATCATGGCTTGAATGCCGGTGCTTTCTTTTGGAGTCTGGATGATGCTTCTTCTAGTCGTTATCGGGTTATCGGCGGTCGGTTGGT (Variable)