Template: SRS052027_LANL_scaffold_25529 strand: + 25867-25982 ref: 25867-25982 Variable: SRS052027_LANL_scaffold_25529 strand: + 25322-25437 alnlen 115 mutations 26 involve-A 26 involve-T 0 25867 CGGTGTCCTGTTCAGCGGTAATGCGAATAACAGCTCGAATGCCGGTTTTGCGTATGCGAATTCGAATAACACGCCCTCGAATACGAATGCGAATATCAGGTCTCGCCAATGATTT ::::::::::::: ::::: ::::: : :: ::::: :::::::::::::: :::: :::: : :: :::::::: :::: :::: : :: ::::::::: :: ::: 25322 CGGTGTCCTGTTCGGCGGTTCTGCGATTCACGGCTCGGCTGCCGGTTTTGCGTGTGCGCTTTCGGCTTACGCGCCCTCGCTTACGGGTGCGCGTGTCGGGTCTCGCCTTTGCTTT