Color scheme: A-to-N substitutions are highlighted in yellow; other substitutions in gray
Template:  SRS052027_LANL_scaffold_25529 strand: + 25867-25982 ref: 25867-25982

Variable:  SRS052027_LANL_scaffold_25529 strand: + 25322-25437 alnlen 115 mutations 26 involve-A 26 involve-T 0

CGGTGTCCTGTTCAGCGGTAATGCGAATAACAGCTCGAATGCCGGTTTTGCGTATGCGAATTCGAATAACACGCCCTCGAATACGAATGCGAATATCAGGTCTCGCCAATGATTT (Template)
CGGTGTCCTGTTCGGCGGTTCTGCGATTCACGGCTCGGCTGCCGGTTTTGCGTGTGCGCTTTCGGCTTACGCGCCCTCGCTTACGGGTGCGCGTGTCGGGTCTCGCCTTTGCTTT (Variable)