Color scheme: A-to-N substitutions are highlighted in yellow; other substitutions in gray
Template:  SRS052027_LANL_scaffold_25763 strand: - 12166-12285 ref: 12161-12286

Variable:  SRS052027_LANL_scaffold_25763 strand: - 12937-13056 alnlen 119 mutations 14 involve-A 13 involve-T 0

GGTACTGGAGTAGCAGTGAGAACAGTCAGAACAACAGCTGGAACGTGAACTTTAGTAATGGCAACTTCAACAACAACAACAAGTACAACAGTAACATGGTGAGAGCGGTTGCAGCACTT (Template)
GGTACTGGAGTAGCAGTGAGGGCAGTCAGGGCAACAGCTGGAACGTGTACTTTAGTAATGGCAACTTCAACGGCGGCAGCAAGTGCAACAGTGTCATGGTGAGAGCGGTTGCAGCATTT (Variable)