Color scheme: A-to-N substitutions are highlighted in yellow; other substitutions in gray
Template:  SRS052697_LANL_scaffold_26371 strand: + 16585-16697 ref: 16585-16697

Variable:  SRS052697_LANL_scaffold_26371 strand: + 16040-16152 alnlen 112 mutations 14 involve-A 14 involve-T 0

GGTGTCTTGTTCGGCGGTAATGCGAATAACAGCGCGAATGCCGGGCTTTCGTACGCGAATACGAATAACACGGCTACGAATACGAATGCGAATATCGGCTCTCAGCTATACT (Template)
GGTGTCTTGTTCGGCGGTTTTGCGAATAACGGCGCGGGTGCCGGGCTTTCGTGCGCGTATACGAATTACGCGGCTACGAATGCGGATGCGAATATCGGCTCTCGGCTTTGCT (Variable)