Template:  SRS052697_LANL_scaffold_63124 strand: - 7808-7884 ref: 7807-7885
Variable:  SRS052697_LANL_scaffold_63124 strand: - 9759-9835 alnlen 76 mutations 13 involve-A 13 involve-T 0

7884       CAACAACAATCCCGCAGGTAACCGCTGGGACAATAATTCTGGTAATGCCAATAGCAATTATGGTTTTCGAGCCACT (revcomp)
           ::::  :  :::::::::: :::::::::::: :  :::::::  ::::  :::: ::::::::::::::::::::
9835       CAACTTCGTTCCCGCAGGTTACCGCTGGGACACTGGTTCTGGTGCTGCCGTTAGCTATTATGGTTTTCGAGCCACT (revcomp)