Template:  SRS053335_LANL_scaffold_12895 strand: - 820-947 ref: 821-948
Variable:  SRS053335_LANL_scaffold_12895 strand: - 1553-1680 alnlen 127 mutations 17 involve-A 17 involve-T 0

947        TACTGGTCCTCCTCGGAGTTCTACAACAATCCGGCGAACAACGCTCTTTATGTGAATGTGAACAACGGCAACGTGAACAACAACAATAAGAACAACAGAAATAGTTACGTGCGTCCGGTCTTGGCTT (revcomp)
           :::::::::::::::::::::: : ::  :::::::: :  :::::::::::::: ::::: :  :::::::::: ::::: ::: :::: :: :::: ::::::::::::::::::::::::::::
1680       TACTGGTCCTCCTCGGAGTTCTGCGACCTTCCGGCGAGCGGCGCTCTTTATGTGAGTGTGAGCGGCGGCAACGTGTACAACTACAGTAAGGACGACAGGAATAGTTACGTGCGTCCGGTCTTGGCTT (revcomp)