Template: SRS053335_LANL_scaffold_12895 strand: - 820-947 ref: 821-948 Variable: SRS053335_LANL_scaffold_12895 strand: - 1553-1680 alnlen 127 mutations 17 involve-A 17 involve-T 0 947 TACTGGTCCTCCTCGGAGTTCTACAACAATCCGGCGAACAACGCTCTTTATGTGAATGTGAACAACGGCAACGTGAACAACAACAATAAGAACAACAGAAATAGTTACGTGCGTCCGGTCTTGGCTT (revcomp) :::::::::::::::::::::: : :: :::::::: : :::::::::::::: ::::: : :::::::::: ::::: ::: :::: :: :::: :::::::::::::::::::::::::::: 1680 TACTGGTCCTCCTCGGAGTTCTGCGACCTTCCGGCGAGCGGCGCTCTTTATGTGAGTGTGAGCGGCGGCAACGTGTACAACTACAGTAAGGACGACAGGAATAGTTACGTGCGTCCGGTCTTGGCTT (revcomp)