Color scheme: A-to-N substitutions are highlighted in yellow; other substitutions in gray
Template:  SRS053335_LANL_scaffold_12895 strand: - 820-947 ref: 821-948

Variable:  SRS053335_LANL_scaffold_12895 strand: - 1553-1680 alnlen 127 mutations 17 involve-A 17 involve-T 0

TACTGGTCCTCCTCGGAGTTCTACAACAATCCGGCGAACAACGCTCTTTATGTGAATGTGAACAACGGCAACGTGAACAACAACAATAAGAACAACAGAAATAGTTACGTGCGTCCGGTCTTGGCTT (Template)
TACTGGTCCTCCTCGGAGTTCTGCGACCTTCCGGCGAGCGGCGCTCTTTATGTGAGTGTGAGCGGCGGCAACGTGTACAACTACAGTAAGGACGACAGGAATAGTTACGTGCGTCCGGTCTTGGCTT (Variable)