Color scheme: A-to-N substitutions are highlighted in yellow; other substitutions in gray Template: SRS053603_LANL_scaffold_49461 strand: + 1839-2001 ref: 1839-2000 Variable: SRS053603_LANL_scaffold_49461 strand: + 408-570 alnlen 162 mutations 22 involve-A 22 involve-T 0 TGCCCGCCTTGGGTTACTACAACTCTGGTCAGCTGAACAATGTTGGCAACAACGGCAACTATTGGTCGTCAAGTGCTAACCCATGGAACAGTAACAACGCGTACAACCTGAACTTCAACAGTGGTAACGTCAACGTGAACAACAACAACCGCAACAACGGGT (Template) TGCCCGCCTTGGGTTACTACTACTCTGGTCAGCTGAACGATGTTGGCTACTACGGCTACTATTGGTCGTCGAGTGCTTACCCATGGTTCAGTTACCGCGCGTACGGCCTGTACTTCTACAGTGGTAGCGTCTACGTGTACTACAACGACCGCAACAGCGGGT (Variable)