myDGR

myDGR report for SRS054956_LANL_scaffold_12271

Seq: SRS054956_LANL_scaffold_12271 (38779 bp)

Download:  annotation in gff; reverse transcriptase (RT); target gene; accessory gene

Explore:   TR-VR alignment (colored, MSA); domain organization of the target protein(s); similar RTs

Visualize: summary of the putative DGR system(s) (explain)

Overview 1 Locus 1: 3171-24096 bp Zoom in on locus 1 Feature: CDS Location: 3171-3611 bp Feature: CDS Location: 3608-4348 bp Feature: CDS Location: 4475-4678 bp Feature: CDS Location: 4695-4859 bp Feature: CDS Location: 4865-5407 bp Feature: CDS Location: 5400-5720 bp Feature: CDS Location: 5737-5904 bp Feature: CDS Location: 6047-6511 bp Feature: CDS Location: 6726-7253 bp Feature: CDS Location: 7264-7566 bp Feature: CDS Location: 7677-9287 bp Feature: CDS Location: 9378-9638 bp Feature: CDS Location: 9643-10707 bp Feature: CDS Location: 10755-10955 bp Feature: CDS Location: 10980-11330 bp Feature: CDS Location: 11346-11849 bp Feature: CDS Location: 11752-12123 bp Feature: CDS Location: 12343-12552 bp Feature: RT Des: DGR reverse transcriptase Location: 12549-13784 bp Feature: accessory Des: PAG2 Location: 14292-14702 bp Feature: target Des: target gene diversified by DGR Location: 14766-15725 bp Feature: CDS Location: 15740-15871 bp Feature: CDS Location: 16513-18759 bp Feature: CDS Location: 18763-19134 bp Feature: CDS Location: 19150-22302 bp Feature: CDS Location: 22265-22741 bp Feature: CDS Location: 22777-23274 bp Feature: CDS Location: 23307-23720 bp Feature: CDS Location: 23740-24096 bp Sorry, your browser does not support inline SVG.