Template: SRS054956_LANL_scaffold_38823 strand: + 36263-36373 ref: 36263-36373 Variable: SRS054956_LANL_scaffold_38823 strand: + 36028-36138 alnlen 110 mutations 23 involve-A 23 involve-T 0 36263 GTCACTAAATTAGGCAGTAAATGGAATAATGGTCTGAAATCAGGGACTTTCTATTGGAATCTCAACAATGCCACTTCTAATCGCAATCGGAATATCAGCAGGCAGTCAGT ::: ::: ::: ::: ::: ::::::: :::::::: : :: ::: ::::::::::: ::::: :: ::::: ::::: ::::: :::: :::: :: ::: ::: :: 36028 GTCGCTATATTGGGCGGTACATGGAATGATGGTCTGCAGTCGGGGGCTTTCTATTGGTATCTCGACGATGCCGCTTCTGCTCGCAGTCGGGGTATCGGCGGGCGGTCGGT