Template:  SRS055982_Baylor_scaffold_17347 strand: + 1309-1394 ref: 1309-1394
Variable:  SRS055982_Baylor_scaffold_17347 strand: + 3383-3468 alnlen 85 mutations 19 involve-A 19 involve-T 0

1309       GCCGGCTCGGCCAACAACGCCCGCAACGTCAACACCGATGGCACTCTGAACAGGAACAACGCCTACAACGGCAACAACGGCCTGC 
           :::::::::::: ::  :::::::  ::::  : ::::::::::::::  : :: ::  :::::::  :::: ::  ::::::::
3383       GCCGGCTCGGCCTACTTCGCCCGCTTCGTCCTCGCCGATGGCACTCTGGGCTGGGACTTCGCCTACGGCGGCTACGGCGGCCTGC