Template:  SRS055982_Baylor_scaffold_3508 strand: - 4142-4240 ref: 4143-4241
Variable:  SRS055982_Baylor_scaffold_3508 strand: - 4779-4877 alnlen 98 mutations 13 involve-A 13 involve-T 0

4240       GCGAGTACAATTCCAACAACGCGTTCATCTACAACGGCAACACGGGCAACGTGAACAACAACAACAAGTATAACACGAACGCCGTGCGTCCGGTTTCC (revcomp)
           :::::::::::::::::: ::::::: :::::: ::::  ::::::: :::::  :::: ::  :::::::: :::: ::::::::::::::::::::
4877       GCGAGTACAATTCCAACATCGCGTTCGTCTACATCGGCGGCACGGGCTACGTGGGCAACTACGGCAAGTATAGCACGCACGCCGTGCGTCCGGTTTCC (revcomp)
Template:  SRS055982_Baylor_scaffold_3508 strand: - 4142-4238 ref: 4143-4241
Variable:  SRS055982_Baylor_scaffold_3508 strand: - 34311-34407 alnlen 96 mutations 14 involve-A 14 involve-T 0

4238       GAGTACAATTCCAACAACGCGTTCATCTACAACGGCAACACGGGCAACGTGAACAACAACAACAAGTATAACACGAACGCCGTGCGTCCGGTTTCC (revcomp)
           :::::::::::: ::  ::::::: :::::::::::: :::::::  ::::  :: : ::: :::::::  :::::::::::::::::::::::::
34407      GAGTACAATTCCTACGGCGCGTTCGTCTACAACGGCATCACGGGCTTCGTGTTCAGCTACAGCAAGTATCGCACGAACGCCGTGCGTCCGGTTTCC (revcomp)