Template: SRS055982_Baylor_scaffold_3547 strand: + 49137-49252 ref: 49137-49252 Variable: SRS055982_Baylor_scaffold_3547 strand: + 48592-48707 alnlen 115 mutations 23 involve-A 23 involve-T 0 49137 CGGTGTCCTGTTCAGCGGTAATGCGAATAACAGCTCGAATGCCGGTTTTGCGTATGCGAATTCGAATAACACGCCCTCGAATACGAATGCGAATATCAGGTCTCGCCAATGATTT ::::::::::::: ::::: ::::: :: :: :::::: :::::::::::::: :::: ::::: : :: :::::::: : :: ::::: : :: ::::::::: :: ::: 48592 CGGTGTCCTGTTCGGCGGTTATGCGTATTACGGCTCGAGTGCCGGTTTTGCGTGTGCGCATTCGTCTGACGCGCCCTCGCTTGCGCATGCGGCTGTCGGGTCTCGCCTTTGCTTT Template: SRS055982_Baylor_scaffold_3547 strand: + 49140-49251 ref: 49137-49252 Variable: SRS055982_Baylor_scaffold_3547 strand: + 8710-8821 alnlen 111 mutations 25 involve-A 25 involve-T 0 49140 TGTCCTGTTCAGCGGTAATGCGAATAACAGCTCGAATGCCGGTTTTGCGTATGCGAATTCGAATAACACGCCCTCGAATACGAATGCGAATATCAGGTCTCGCCAATGATT :::::::::: ::::: :::: : : ::::: :::::::::::::: :::: :::: : :: ::::::::::: :: ::::: :: :: ::::::::: :: :: 8710 TGTCCTGTTCGGCGGTGCTGCGTCTTCCGGCTCGCTTGCCGGTTTTGCGTGTGCGTCTTCGGCTTACGCGCCCTCGAATGCGTATGCGTATGTCGGGTCTCGCCTTTGCTT