Color scheme: A-to-N substitutions are highlighted in yellow; other substitutions in gray
Template:  SRS056259_LANL_scaffold_15498 strand: - 7959-8073 ref: 7960-8074

Variable:  SRS056259_LANL_scaffold_15498 strand: - 8157-8271 alnlen 114 mutations 20 involve-A 20 involve-T 0

GGGTGTCCTTTTCAGCGGTAATACGAATAATGGCGATCATGCAGGCTTCGGTTATGCGAATACGAATAACACCCCCTCGAATACGAATGCGAATGTCAGCTCTCAGCTATGATT (Template)
GGGTGTCCTTTTCGGCGGTTATACGCATTATGGCGGTCTTGCGGGCTTCGGTTTTGCGAATACGTATGCCGCCCCCTCGAATGCGCTTGCGTATGTCGGCTCTCGGCTTTGTTT (Variable)