Color scheme: A-to-N substitutions are highlighted in yellow; other substitutions in gray
Template:  SRS056259_LANL_scaffold_58167 strand: + 36263-36375 ref: 36263-36375

Variable:  SRS056259_LANL_scaffold_58167 strand: + 35718-35830 alnlen 112 mutations 18 involve-A 16 involve-T 1

GGTGTCTTGTTCGGCGGTAATGCGAATAACAGCGCGAATGCCGGGCTTTCGTACGCGAATACGAATAACACGGCTACGAATACGAATGCGAATATCGGCTCTCAGCTATACT (Template)
GGTGTTTTGTTCGGCGGGCATGCGTATAACGGCGCGTCTGCCGGGCTTTCGTTCGCGTATACGTATAACACGGCTGCGTATACGTCTGCGAATGTCGGCTCTCGGCTTTGCT (Variable)
Template:  SRS056259_LANL_scaffold_58167 strand: + 36301-36375 ref: 36263-36375

Variable:  SRS056259_LANL_scaffold_58167 strand: + 489-563 alnlen 74 mutations 13 involve-A 13 involve-T 0

TGCCGGGCTTTCGTACGCGAATACGAATAACACGGCTACGAATACGAATGCGAATATCGGCTCTCAGCTATACT (Template)
TGCCGGGCTTTCGTGCGCGAGTACGTATGGCGCGGCTGCGTATACGAATGCGGATGTCGGCTCTCGGCTTTGCT (Variable)