myDGR

myDGR report for SRS056519_LANL_scaffold_2340

Seq: SRS056519_LANL_scaffold_2340 (54339 bp)

Download:  annotation in gff; reverse transcriptase (RT); target gene; accessory gene

Explore:   TR-VR alignment (colored, MSA); domain organization of the target protein(s); similar RTs

Visualize: summary of the putative DGR system(s) (explain)

Overview 1 Locus 1: 31115-52325 bp Zoom in on locus 1 Feature: CDS Location: 31115-31627 bp Feature: CDS Location: 32167-32538 bp Feature: CDS Location: 32548-33378 bp Feature: CDS Location: 33704-34171 bp Feature: CDS Location: 34171-34392 bp Feature: CDS Location: 34798-35310 bp Feature: CDS Location: 35315-38185 bp Feature: CDS Location: 38182-39387 bp Feature: CDS Location: 39389-39622 bp Feature: CDS Location: 39606-40628 bp Feature: target Des: target gene diversified by DGR Location: 40649-41968 bp Feature: CDS Location: 41998-42201 bp Feature: CDS Location: 42241-42423 bp Feature: RT Des: DGR reverse transcriptase Location: 42485-43300 bp Feature: CDS Location: 43266-43496 bp Feature: accessory Des: PAG1 Location: 43444-44028 bp Feature: CDS Location: 44050-44445 bp Feature: CDS Location: 44452-45627 bp Feature: CDS Location: 45630-45893 bp Feature: CDS Location: 45921-46388 bp Feature: CDS Location: 46366-46782 bp Feature: CDS Location: 46811-47518 bp Feature: CDS Location: 47521-48078 bp Feature: CDS Location: 48120-48521 bp Feature: CDS Location: 48529-48705 bp Feature: CDS Location: 48708-49373 bp Feature: CDS Location: 49464-49757 bp Feature: CDS Location: 50144-50659 bp Feature: CDS Location: 50656-51063 bp Feature: CDS Location: 51060-52325 bp Sorry, your browser does not support inline SVG.