Template: SRS057791_LANL_scaffold_13865 strand: - 1529-1690 ref: 1528-1690 Variable: SRS057791_LANL_scaffold_13865 strand: - 3337-3498 alnlen 161 mutations 15 involve-A 15 involve-T 0 1690 CAGCGATGGGTCGTTGAACAATGTTGGGAACAACGGTTACTATTGGTCGGCAGTTCCGAACAACACGAACAACGGTTGCAACCTGAACTTCAACTGGAGCAACGTGAACCCTCAGAACAACAACAACCGTTCGTACGGGTTTGCGGCACGGCCAGTCTCAG (revcomp) ::::::::::::::::::: ::::::::::: ::::::::::::::::::::::::: :: ::::: :: :::::::: :::::::::: :::: ::: ::::: :::::::::: :::::::::::::::::::::::::::::::::::::::::: 3498 CAGCGATGGGTCGTTGAACTATGTTGGGAACTTCGGTTACTATTGGTCGGCAGTTCCGGGCAGCACGAGCAGCGGTTGCAGCCTGAACTTCGGCTGGGGCAGCGTGAGCCCTCAGAACTACAACAACCGTTCGTACGGGTTTGCGGCACGGCCAGTCTCAG (revcomp)