Color scheme: A-to-N substitutions are highlighted in yellow; other substitutions in gray
Template:  SRS057791_LANL_scaffold_13865 strand: - 1529-1690 ref: 1528-1690

Variable:  SRS057791_LANL_scaffold_13865 strand: - 3337-3498 alnlen 161 mutations 15 involve-A 15 involve-T 0

CAGCGATGGGTCGTTGAACAATGTTGGGAACAACGGTTACTATTGGTCGGCAGTTCCGAACAACACGAACAACGGTTGCAACCTGAACTTCAACTGGAGCAACGTGAACCCTCAGAACAACAACAACCGTTCGTACGGGTTTGCGGCACGGCCAGTCTCAG (Template)
CAGCGATGGGTCGTTGAACTATGTTGGGAACTTCGGTTACTATTGGTCGGCAGTTCCGGGCAGCACGAGCAGCGGTTGCAGCCTGAACTTCGGCTGGGGCAGCGTGAGCCCTCAGAACTACAACAACCGTTCGTACGGGTTTGCGGCACGGCCAGTCTCAG (Variable)