Color scheme: A-to-N substitutions are highlighted in yellow; other substitutions in gray
Template:  SRS063985_LANL_scaffold_6656 strand: + 32692-32813 ref: 32692-32813

Variable:  SRS063985_LANL_scaffold_6656 strand: + 32328-32449 alnlen 121 mutations 16 involve-A 16 involve-T 0

GCTTCGTGTGCGCCTCTCCGGTGCTAACGCTAACAATGGCACGAATGCAGGGGCGTTTGCTACGAATACGAATGATGCAGCCTCGAATTCGAATGCGAATGTGTCCGCTCCCCTATACTTT (Template)
GCTTCGTGTGCGCCTCTCCGGTGCTGGCGCTAACTCTGGCACGTATGCGGGGGCGTTTGCTGCGGATACGTATGATGCGGCCTCGTATTCGTATGCGGCTGTGTCCGCTCCCCTCTGCTTT (Variable)