Color scheme: A-to-N substitutions are highlighted in yellow; other substitutions in gray
Template:  SRS064276_LANL_scaffold_14449 strand: + 38237-38327 ref: 38237-38327

Variable:  SRS064276_LANL_scaffold_14449 strand: + 37480-37570 alnlen 90 mutations 11 involve-A 11 involve-T 0

CTTCCAGCAGTTGGAACGTGAACTTCAACAACGGCAACGTCAACACGAACAACCGCCAGAACGCGAACCGGGTTCGTCCCCTCGCCGCAA (Template)
CTTCCAGCAGTTGGAACGTGCACTTCAGCGGCGGCATCGTCAGCACGAACGGCCGCCAGAGCGCGGGCCGGGTTCGTCCCCTCGCCGCAA (Variable)