Template:  SRS064276_LANL_scaffold_36918 strand: - 13948-14062 ref: 13949-14063
Variable:  SRS064276_LANL_scaffold_36918 strand: - 14142-14256 alnlen 114 mutations 12 involve-A 12 involve-T 0

14062      GGGGTGTGTTGTTCAGCGGTTCTTCGAATAATGGTGCGAATGCAGGTGTCAGCTACTCGAATACGAATAATACGGCGTCGAATACGAATGCGAATATCGGTTCTCAGCTATGCT (revcomp)
           :::::::::::::: :::::::::::::: ::::::::: ::: :::::: ::::::::::::::::: :: :::::::: ::::::::::: :: ::::::::: ::: ::::
14256      GGGGTGTGTTGTTCGGCGGTTCTTCGAATGATGGTGCGAGTGCGGGTGTCGGCTACTCGAATACGAATGATGCGGCGTCGTATACGAATGCGTATGTCGGTTCTCGGCTTTGCT (revcomp)
Template:  SRS064276_LANL_scaffold_36918 strand: - 13948-14022 ref: 13949-14063
Variable:  SRS064276_LANL_scaffold_36918 strand: - 51041-51115 alnlen 74 mutations 14 involve-A 14 involve-T 0

14022      TGCAGGTGTCAGCTACTCGAATACGAATAATACGGCGTCGAATACGAATGCGAATATCGGTTCTCAGCTATGCT (revcomp)
           ::: :::::: ::: ::::  : ::::: ::::::::::: ::::: :::::  : ::::::::: ::: ::::
51115      TGCGGGTGTCGGCTGCTCGGCTGCGAATTATACGGCGTCGTATACGTATGCGTTTTTCGGTTCTCGGCTTTGCT (revcomp)