Template:  SRS064423_LANL_scaffold_46697 strand: - 12482-12677 ref: 12484-12678
Variable:  SRS064423_LANL_scaffold_46697 strand: - 14292-14487 alnlen 195 mutations 30 involve-A 22 involve-T 1

12677      TCTTACCTCCTGCTTCGGGTTTCCGCAACAACAGCGATGGGTCGTTGAACAATGTTGGGAACAACGGTTA-CTATTGGTCGGCAGTTCCGAACAACACGAACAACGGTTGCAACCTGAACTTCAACTGGAGCAACGTGAACCCTCAGA--ACAACAACAACCGTTCGTACGGGTTTGCGGCACGGTCAGTCTCAG (revcomp)
           ::::   :::::::::::::::::::::: ::::::::::::::::: ::::::::::: ::::::: :  :: ::::::::::::::::: :: :: :  :: ::::::: ::::: :::::  :::: :: :::::  ::::::::  :: ::::   :::::::::::::::::::::::::::::::::::
14487      TCTTCTTTCCTGCTTCGGGTTTCCGCAACTACAGCGATGGGTCGTTGGACAATGTTGGGTACAACGGGTGTCTGTTGGTCGGCAGTTCCGAGCAGCATGGGCAGCGGTTGCCACCTGTACTTCGGCTGGGGCTACGTGGGCCCTCAGAGGACGACAAATTCCGTTCGTACGGGTTTGCGGCACGGTCAGTCTCAG (revcomp)