Color scheme: A-to-N substitutions are highlighted in yellow; other substitutions in gray
Template:  SRS064557_LANL_scaffold_20476 strand: + 1268-1383 ref: 1268-1383

Variable:  SRS064557_LANL_scaffold_20476 strand: + 716-831 alnlen 115 mutations 17 involve-A 17 involve-T 0

CGGTGTCCTGTTCAGCGGTAATGCGAATAACAGCGCGAATGCCGGTTTTGCGTATGCGAATTCGAATAACACGCCCTCGAATACGAATGCGAATGTCAGGTCTCGCCAATGATTT (Template)
CGGTGTCCTGTTCGGCGGTGATGCGAATAACGGCGCGCATGCCGGTTTTGCGTATGCGCATTCGTCTTACGCGCCCTCGTATACGGCTGCGTATGTCGGGTCTCGCCTTTGCTTT (Variable)