Template: SRS064774_LANL_scaffold_61312 strand: + 50599-50705 ref: 50599-50705 Variable: SRS064774_LANL_scaffold_61312 strand: + 8596-8702 alnlen 106 mutations 13 involve-A 11 involve-T 0 50599 AGCGAGAATAGTCAGCATAACAGTTGGATATTGAACTTTGGTAGTGGCAACTTGAACAACAACAACAAGTACAACAGTAACTATGTACGTCCTTGCACAGCGTCTA :::::: ::::::::::: ::::::::::::::::::::::::::::: :::: ::::: : :::::: ::::::: ::::::::::::::::::::: : :: 8596 AGCGAGTATAGTCAGCATTACAGTTGGATATTGAACTTTGGTAGTGGCGGCTTGTACAACGGCTACAAGTGCAACAGTGGCTATGTACGTCCTTGCACAGCATTTA Template: SRS064774_LANL_scaffold_61312 strand: + 50599-50705 ref: 50599-50705 Variable: SRS064774_LANL_scaffold_61312 strand: + 49792-49898 alnlen 106 mutations 16 involve-A 14 involve-T 0 50599 AGCGAGAATAGTCAGCATAACAGTTGGATATTGAACTTTGGTAGTGGCAACTTGAACAACAACAACAAGTACAACAGTAACTATGTACGTCCTTGCACAGCGTCTA ::::::: :::::::::: :::::::::::::: ::::::::::::::::::: :: : :: ::::: : ::::: ::: :::::::::::::::::: : :: 49792 AGCGAGAGTAGTCAGCATTACAGTTGGATATTGGGCTTTGGTAGTGGCAACTTGGGCAGCTACGGCAAGTGCTACAGTTACTTTGTACGTCCTTGCACAGCATTTA