Color scheme: A-to-N substitutions are highlighted in yellow; other substitutions in gray
Template:  SRS064774_LANL_scaffold_61312 strand: + 50599-50705 ref: 50599-50705

Variable:  SRS064774_LANL_scaffold_61312 strand: + 8596-8702 alnlen 106 mutations 13 involve-A 11 involve-T 0

AGCGAGAATAGTCAGCATAACAGTTGGATATTGAACTTTGGTAGTGGCAACTTGAACAACAACAACAAGTACAACAGTAACTATGTACGTCCTTGCACAGCGTCTA (Template)
AGCGAGTATAGTCAGCATTACAGTTGGATATTGAACTTTGGTAGTGGCGGCTTGTACAACGGCTACAAGTGCAACAGTGGCTATGTACGTCCTTGCACAGCATTTA (Variable)
Template:  SRS064774_LANL_scaffold_61312 strand: + 50599-50705 ref: 50599-50705

Variable:  SRS064774_LANL_scaffold_61312 strand: + 49792-49898 alnlen 106 mutations 16 involve-A 14 involve-T 0

AGCGAGAATAGTCAGCATAACAGTTGGATATTGAACTTTGGTAGTGGCAACTTGAACAACAACAACAAGTACAACAGTAACTATGTACGTCCTTGCACAGCGTCTA (Template)
AGCGAGAGTAGTCAGCATTACAGTTGGATATTGGGCTTTGGTAGTGGCAACTTGGGCAGCTACGGCAAGTGCTACAGTTACTTTGTACGTCCTTGCACAGCATTTA (Variable)