Template: SRS065278_LANL_scaffold_62372 strand: - 12284-12479 ref: 12286-12480 Variable: SRS065278_LANL_scaffold_62372 strand: - 14094-14289 alnlen 195 mutations 30 involve-A 22 involve-T 1 12479 TCTTACCTCCTGCTTCGGGTTTCCGCAACAACAGCGATGGGTCGTTGAACAATGTTGGGAACAACGGTTA-CTATTGGTCGGCAGTTCCGAACAACACGAACAACGGTTGCAACCTGAACTTCAACTGGAGCAACGTGAACCCTCAGA--ACAACAACAACCGTTCGTACGGGTTTGCGGCACGGTCAGTCTCAG (revcomp) :::: :::::::::::::::::::::: ::::::::::::::::: ::::::::::: ::::::: : :: ::::::::::::::::: :: :: : :: ::::::: ::::: ::::: :::: :: ::::: :::::::: :: :::: ::::::::::::::::::::::::::::::::::: 14289 TCTTCTTTCCTGCTTCGGGTTTCCGCAACTACAGCGATGGGTCGTTGGACAATGTTGGGTACAACGGGTGTCTGTTGGTCGGCAGTTCCGAGCAGCATGGGCAGCGGTTGCCACCTGTACTTCGGCTGGGGCTACGTGGGCCCTCAGAGGACGACAAATTCCGTTCGTACGGGTTTGCGGCACGGTCAGTCTCAG (revcomp)