Template:  SRS065278_LANL_scaffold_62372 strand: - 12284-12479 ref: 12286-12480
Variable:  SRS065278_LANL_scaffold_62372 strand: - 14094-14289 alnlen 195 mutations 30 involve-A 22 involve-T 1

12479      TCTTACCTCCTGCTTCGGGTTTCCGCAACAACAGCGATGGGTCGTTGAACAATGTTGGGAACAACGGTTA-CTATTGGTCGGCAGTTCCGAACAACACGAACAACGGTTGCAACCTGAACTTCAACTGGAGCAACGTGAACCCTCAGA--ACAACAACAACCGTTCGTACGGGTTTGCGGCACGGTCAGTCTCAG (revcomp)
           ::::   :::::::::::::::::::::: ::::::::::::::::: ::::::::::: ::::::: :  :: ::::::::::::::::: :: :: :  :: ::::::: ::::: :::::  :::: :: :::::  ::::::::  :: ::::   :::::::::::::::::::::::::::::::::::
14289      TCTTCTTTCCTGCTTCGGGTTTCCGCAACTACAGCGATGGGTCGTTGGACAATGTTGGGTACAACGGGTGTCTGTTGGTCGGCAGTTCCGAGCAGCATGGGCAGCGGTTGCCACCTGTACTTCGGCTGGGGCTACGTGGGCCCTCAGAGGACGACAAATTCCGTTCGTACGGGTTTGCGGCACGGTCAGTCTCAG (revcomp)