Color scheme: A-to-N substitutions are highlighted in yellow; other substitutions in gray
Template:  SRS077730_LANL_scaffold_4938 strand: + 34313-34428 ref: 34313-34428

Variable:  SRS077730_LANL_scaffold_4938 strand: + 33582-33697 alnlen 115 mutations 12 involve-A 12 involve-T 0

ACGGTTGCTTATTCGTGGCGGTAATTATGGTAATGGCGGTAACGCCGGGGAGGCTAACGGCAATTTCAACAACCCGCGTTCTATCTCCAATGTGAATGTGGGGCTGTTTTCCGCT (Template)
ACGGTTGCTTCTTCGTGGCGGTGATTATGGTCGTGGCGGTTCCGCCGGGGAGGCTAGCGGCAATTTCGGCCACCCGCGTTCTATCTCCGGTGTGAATGTGGGGCTGTTTTCCGCT (Variable)
Template:  SRS077730_LANL_scaffold_4938 strand: + 34335-34429 ref: 34313-34428

Variable:  SRS077730_LANL_scaffold_4938 strand: + 33698-33792 alnlen 94 mutations 10 involve-A 10 involve-T 0

AATTATGGTAATGGCGGTAACGCCGGGGAGGCTAACGGCAATTTCAACAACCCGCGTTCTATCTCCAATGTGAATGTGGGGCTGTTTTCCGCTT (Template)
AATTATGGTTCTGGCGGTGACGCCGGGGAGGCTTTCGGCCATTTCTGCAACCCGCGTTCTATCTCCTCTGTGAATGTGGGGCTGTTTTCCGCTT (Variable)