Template:  SRS078176_LANL_scaffold_28758 strand: + 2325-2440 ref: 2325-2440
Variable:  SRS078176_LANL_scaffold_28758 strand: + 1582-1697 alnlen 115 mutations 20 involve-A 20 involve-T 0

2325       GCGTTTTTCTCGTTGCCGGCAACTACAACAATGGAACCAATGCCGGCTCCTGGTACCGCAACGGCAACAACAATTGGAACAACGACAACAACAACGCGTCGTTCCGGGCGGCGGC 
           :::::::::::::::::::: ::: ::::  ::: ::: ::::::::::::::: :::: :::::  : ::: ::::  :: :: :  :: : ::::::::::::::::::::::
1582       GCGTTTTTCTCGTTGCCGGCTACTGCAACCTTGGTACCTATGCCGGCTCCTGGTGCCGCTACGGCTTCGACATTTGGCTCATCGGCCTCAGCTACGCGTCGTTCCGGGCGGCGGC