Template:  JQ680350.1 strand: - 17449-17576 ref: 17450-17577
Variable:  JQ680350.1 strand: - 18093-18220 alnlen 127 mutations 15 involve-A 15 involve-T 0

17576      CTGGCTTGCACGCCCTCATTGGCGGCGGCAATTGGAACAACGGCGTGTATTGCGGTTCACGGGCCGTCAATTGCAACAATTACCCGTGGAACGTGAACACGAACATTGGCGTGTGGTGCGTGTGTGA (revcomp)
           ::::::::: ::::::::::::::::::: :::::  : ::::::::::::::::::: ::::::::: ::::: :: :::::::::::: ::::  ::::  : ::::::::::::::::::::::
18220      CTGGCTTGCGCGCCCTCATTGGCGGCGGCTATTGGGGCGACGGCGTGTATTGCGGTTCGCGGGCCGTCTATTGCCACGATTACCCGTGGAGCGTGGGCACGGGCTTTGGCGTGTGGTGCGTGTGTGA (revcomp)