Color scheme: A-to-N substitutions are highlighted in yellow; other substitutions in gray
Template:  JQ680355.1 strand: - 3781-3874 ref: 3782-3875

Variable:  JQ680355.1 strand: - 1727-1820 alnlen 93 mutations 17 involve-A 15 involve-T 0

GCGTCGAACCGTGCGGTTCGCGGGTACAATTCGGCCCGCAACTGGAACAACAACAATGCTACGAACTCCAACCCGAACGTCGGTTTCCGCCCC (Template)
GCGTCGAGCCGTGCGATTCGCGGGTACTATTCGGCCCGCCTCTGGGACGACGGCAGTGCTACGGGCTTCGGCCCGCTCGTCGGTTTCCGCCCC (Variable)