Color scheme: A-to-N substitutions are highlighted in yellow; other substitutions in gray
Template:  JQ680366.1 strand: - 8817-8929 ref: 8818-8930

Variable:  JQ680366.1 strand: - 9471-9583 alnlen 112 mutations 10 involve-A 10 involve-T 0

GGTTGCCTATCCGTGGGTCGGCGTTCAACAATACTTCTAATTCGGGTCCGTCCGCTCTCAACTTGAATAACCCTCGTTCCAACTCGAACGACAACATTGGTTTCCGCTCCGC (Template)
GGTTGCCTCTCCGTGGGTCGGCGTTCCACAATACTTCTCATTCGGGTCCGTCCGCTCTCCACTTGCTTAACCCTCGTTCCGGCTCGAACGACGACGTTGGTTTCCGCTCCGC (Variable)