Color scheme: A-to-N substitutions are highlighted in yellow; other substitutions in gray
Template:  ACPP01000012.1 strand: - 2331-2450 ref: 2326-2451

Variable:  ACPP01000012.1 strand: - 3102-3221 alnlen 119 mutations 11 involve-A 9 involve-T 1

GGCACTGGAGTAGCAGTGAGAACAGTCAGAACAACAGCTGGAACGTGAACTTTAGTAATGGCAACTTCAACAACAACAACAAGTACAACAGTAACATGGTGAGAGCGGTTGCAGCACTT (Template)
GGCACTGGAGTAGCAGTGAGAGCAGTCAGAACTACAGCTGGGTCGTGAACATTAGTTATGGCAACTTCTACTACAGCAACAAGTTCAACAGTAACATGGTGAGAGCGGTTGCAGCATTT (Variable)
Template:  ACPP01000012.1 strand: - 2331-2445 ref: 2326-2451

Variable:  ACPP01000012.1 strand: + 56749-56863 alnlen 114 mutations 16 involve-A 15 involve-T 0

TGGAGTAGCAGTGAGAACAGTCAGAACAACAGCTGGAACGTGAACTTTAGTAATGGCAACTTCAACAACAACAACAAGTACAACAGTAACATGGTGAGAGCGGTTGCAGCACTT (Template)
TGGAGTAGCAGTGAGCGCAGTCAGGGCAACAGCTGGGGCGTGTACTTTAGTAATGGCAACTTCTACGGCAACTTCAAGTGCAGCAGTAGCATGGTGAGAGCGGTTGCAGCATTT (Variable)