Template: AFXK01000001.1 strand: - 1008290-1008394 ref: 1008289-1008395 Variable: AFXK01000001.1 strand: - 1009683-1009787 alnlen 104 mutations 15 involve-A 13 involve-T 0 1008394 CGCAGAACGGCCCGAACAACGCGTGGATCCAGAACTTCGACGATGGCAACCAGAACAACGACGACAAGGACAACGCACGGCCCGCTTTCGCCGTCCGCAGCATC (revcomp) :::::: ::::::: :: ::::::::::::: ::::: ::::::: ::::: : ::::: :::::: : :::::::::::::::::::::::::::: ::: 1009787 CGCAGACCGGCCCGCTCAGCGCGTGGATCCAGGGCTTCGGCGATGGCTACCAGCTCTACGACTACAAGGGCTACGCACGGCCCGCTTTCGCCGTCCGCAGAATC (revcomp) Template: AFXK01000001.1 strand: - 1008290-1008394 ref: 1008289-1008395 Variable: AFXK01000001.1 strand: - 1008997-1009101 alnlen 104 mutations 17 involve-A 16 involve-T 0 1008394 CGCAGAACGGCCCGAACAACGCGTGGATCCAGAACTTCGACGATGGCAACCAGAACAACGACGACAAGGACAACGCACGGCCCGCTTTCGCCGTCCGCAGCATC (revcomp) ::::: :::::::: :: ::::::::::::: ::::: :: ::::: :::: :: ::::: ::::: : ::::::::::::::::::::::::::: ::: 1009101 CGCAGCACGGCCCGTTCAGCGCGTGGATCCAGGGCTTCGGCGGTGGCACCCAGGACTTCGACGTCAAGGGCTTCGCACGGCCCGCTTTCGCCGTCCGCAGAATC (revcomp)