Template:  AMFD01000008.1 strand: + 923-1038 ref: 923-1038
Variable:  AMFD01000008.1 strand: + 623-738 alnlen 115 mutations 17 involve-A 17 involve-T 0

923        CGTACCCCTGGTGCTTCAGGCAATGCTTGGAATGTGAATTGGAATACCAATGCTGGTCAGCTGAATGGCAATAATACCGTCGGCAATAGCAATGCCAATGGGGGTGTACGTCCAG 
           :::::::::::::::::::::: :::::::: ::::  ::::: ::::  :::::::::::::  ::::  :  ::::::::::  ::::  :::::::::::::::::::::::
623        CGTACCCCTGGTGCTTCAGGCACTGCTTGGACTGTGGGTTGGACTACCGCTGCTGGTCAGCTGGGTGGCGGTCTTACCGTCGGCGGTAGCGCTGCCAATGGGGGTGTACGTCCAG