Color scheme: A-to-N substitutions are highlighted in yellow; other substitutions in gray
Template:  AMFJ01002827.1 strand: + 5523-5658 ref: 5523-5658

Variable:  AMFJ01002827.1 strand: + 5050-5185 alnlen 135 mutations 19 involve-A 18 involve-T 1

AGGCTCAGTGTGGCGCAACCTCAATGGTAATCGCTATGTTGCGTATCTGAACAGGAACGATTCGAATCGTAAGCTCAACCTCAACAACTTCGACAATGACTGGAATGACCGCTGTCGCTTCGCTGCTGTTCGCAA (Template)
AGGCTCAGTGTGGCGCCACCTCGATGGTTCTCGCTATGTTGCGTATCTGCGCAGGCGCGATTCGCGTCGTAAGCTCCACCTCCGCAACTTCGGCATTGACTGGCTCGGCCGCTGTCGCTTCGCTGCTGTTCGCAA (Variable)