Template: AMFJ01005865.1 strand: + 1220-1342 ref: 1220-1342 Variable: AMFJ01005865.1 strand: + 770-892 alnlen 122 mutations 18 involve-A 17 involve-T 0 1220 GAGAATGTCGGTGTTCTCTGGGCGGTCAATTGCAATTGGAATGACGATGGCTGGAACGTGAATGCCAACTCCGTCGATGATCCGGATGAGTGGAATGGTGACAATCAGGTGTTCTCGCGAAA :: :::::::::::::::::::::::: :::: :::: ::: :::::::::: :::::::::: ::::::::: :: ::::::::::::: ::::: : ::::::::::::::: :: 770 GATAATGTCGGTGTTCTCTGGGCGGTCGGTTGCGGTTGGGATGTCGATGGCTGGCGCGTGAATGCCTACTCCGTCGCTGGTCCGGATGAGTGGGGTGGTGGCTCTCAGGTGTTCTCGCGCAA