Template:  BAAV01000002.1 strand: - 2705-2805 ref: 2706-2806
Variable:  BAAV01000002.1 strand: - 671-771 alnlen 100 mutations 23 involve-A 23 involve-T 0

2805       CGCCGAATTCCGGCAACTCGTACAATGTGCGCAATGTCAACACTTCGGGGGCGTTGAACAACAACAACGCGTACAACGGCAACAGGGGCGTGCGTCCGCT (revcomp)
           ::::: ::::::::: ::::: :  :::::::  ::::  : ::::::::::::::  : ::  :  ::::: :  ::::  : ::::::::::::::::
771        CGCCGCATTCCGGCAGCTCGTGCGGTGTGCGCGGTGTCGGCGCTTCGGGGGCGTTGGGCTACGGCTGCGCGTGCGTCGGCGGCTGGGGCGTGCGTCCGCT (revcomp)