Template:  CAXX010000057.1 strand: + 387-531 ref: 381-530
Variable:  CAXX010000057.1 strand: + 31-175 alnlen 144 mutations 14 involve-A 14 involve-T 0

387        ACGCGAACTTCCCGAACTCTAGCAACTCTTGGTTCATTCGCGGGGGCAACTATGACAATGGTACTAATGCAGGAGTGTTCTACTTCAACAACAACAATGGTGGTGACAACAGTAACAACTCGGCTCGTGCTGTTCTTTCCGCTC 
           :::::  :::::::::::::::: :::::::::::::::::::::::::::::: :: :::::::  :::::::::::::: ::::: :: : ::: :::::::: : ::::::::::::::::::::::::::::::::::::
31         ACGCGGGCTTCCCGAACTCTAGCTACTCTTGGTTCATTCGCGGGGGCAACTATGTCAGTGGTACTTTTGCAGGAGTGTTCTTCTTCATCAGCGACATTGGTGGTGCCTACAGTAACAACTCGGCTCGTGCTGTTCTTTCCGCTC